Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918056.1_cds_XP_016467582.1_60315
CDS Infomation

[gene=LOC107790193] [db_xref=GeneID:107790193] [protein=ankyrin repeat domain-containing protein 13A-like] [protein_id=XP_016467582.1] [location=complement(join(70598..70984,74099..75688))] [gbkey=CDS]
Sequence

ATGGAAGATTTGTCCAAGTACGTTCATAGTCCAGCTCATTTGGCTGTGGTTAAGCGAGAC
TATGCCACTTTGAAAAGGATAGTTGCTGGCCTTCCTCAATTGGCTAAGGCTGGTGAAGTG
AACACTGAGACGGAGTCCCTGACTGCTGAGCTTGATGCAGATGCTGTTACTGCAGTAATT
GATAGGCGGGATGTTCCTGGCCGTGAAACCCCGTTGCACCTTGCTGTTCGGATAAGGGAT
CCTATCTCGGCTGAGATTTTAATGGCTGCAGGCGCCGATTGGAGTCTTCAAAATGAGAAC
GGTTGGAGTGCTCTCCAGGAAGCAGTGTGTACAAAGGAGGAGAATATTGCTATGATTATT
GCTAGGCATTATCAGCCTCTTGCCTGGGCCAAGTGGTGCCGCAGACTTCCTAGGATTGTT
GCCTCAGCTGCTCGAATTCGTGATTTCTACATGGAGATAACCTTTCACTTTGAGAGCTCG
GTAATACCATTCATTGGACGGATTGCCCCGTCAGACACTTACCGGATTTGGAAACGGGGT
TCTAATCTTCGTGCGGATATGACTCTTGCAGGATTCGATGGGTTCCGCATTCAACGTTCA
GATCAAACTTTCCTCTTTCTTGGAGAAGGGTATTCATCGGAAGACGGGAACGTATCTTTG
ACTCCTGGTTCTTTGATTGTGCTTGCTCATAAGGAGAAAGAGATTACAAATGCGNCAAAT
GCATTAGAGGGAGCTGGTGTTCAACCATCAGAAGCTGAAGTTGCCCGTGAAGTGGCTTTG
ATGTCTCAAACAAATATGTATAGGCCAGGAATAGATGTTACTCAGGCGGAGCTTGTTCCC
CACATAAACTGGAGGAGACAGGAGAGGTCTGAGATGGTTGGTGCATGGAAGGCAAAGGTT
TATGATATGCTTCACGTTATGGTCAGTGTAAAATCAAGGCGTGTTCCTGGTGCTATAACC
GATGAGGAGCTTTTTACTGTGAATGATGATGACAAAATAGTGAATGGGGGCGAGCGTGAT
GATTATGATGATGTATTAACAGCTGAAGAACGAATCCAGTTAGATTCTGCTCTTCGGATG
GGCAATGCAGATGGACCTGGTGAGGATGAGGATTTCCATGGAAACTCTGATGGAGGTTCA
TTTCAGAGCTGTGAATCCAATGGTGTTACGAAGGAGAAGAAGAGTTGGTTTGGCTGGAGC
AAGAAAGGTTCCAAAGATACTAGTGATGATTCAGGGGATTCAAAGCTTGTAAAGAAGTTT
TCAAAGTTGGCTCCAGAGGATAGCAAGCAGAGACCAAATGATAGCCACGGATCATCATCC
GAAATTCCTCGGGAGGATACAGGGGATGTCAAAAGGAGCAAAGATAAGAGCAGCAAGAAG
AAAAAGAAGAAAGGAACCGTGGGCGAGTCAAAGACCGAAAGCGAGTATAAAAAAGGATTA
AGACCTGTTTTGTGGTTGACGCCGGACTTCCCCCTGAAAACAGAGGAACTCTTGCCATTG
CTTGACATTCTAGCCAACAAGGTTAAAGCTATCAGAAGACTAAGGGAGCTTTTAACTACT
AAACTACCTCCTGGCACATTTCCTGTCAAGGTAGCTATCCCTATTGTTCCAACCATTCGA
GTTCTTGTTACATTTACAAAGTTCGAAGAGCTTGAACCAGTGGATGAATTCTCAACCCCT
CTTTCAAGCCCTACCAATTTCCAAGATGCTAAGTCCAAGGAATCGGATGGCTCTACGTCT
TGGATTTCATGGATGAGGGGGAACCGTGATGAGCTATCTAGCGACAGTAAAAGCCACAGT
TTCCAGGATGAGATTGACCCTTTCCGTATACCTTCTGATTATGCTTGGGTTGATGCAAAT
GAGAAAAAACGCCGGATGAAAGCCAAGAAAGCAAAGAGGAAGCATAAAAAGCACGGTGCC
ACTAGAAATCCAGAGACTGGGCAGCAGACAAGTGAGGATGTTGACGAACAACTGTGA

Peptide Sequence

PEP ID

XP_016467582.1
PEP Infomation

PREDICTED: ankyrin repeat domain-containing protein 13A-like [Nicotiana tabacum]
Sequence

MEDLSKYVHSPAHLAVVKRDYATLKRIVAGLPQLAKAGEVNTETESLTAELDADAVTAVI
DRRDVPGRETPLHLAVRIRDPISAEILMAAGADWSLQNENGWSALQEAVCTKEENIAMII
ARHYQPLAWAKWCRRLPRIVASAARIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRG
SNLRADMTLAGFDGFRIQRSDQTFLFLGEGYSSEDGNVSLTPGSLIVLAHKEKEITNAXN
ALEGAGVQPSEAEVAREVALMSQTNMYRPGIDVTQAELVPHINWRRQERSEMVGAWKAKV
YDMLHVMVSVKSRRVPGAITDEELFTVNDDDKIVNGGERDDYDDVLTAEERIQLDSALRM
GNADGPGEDEDFHGNSDGGSFQSCESNGVTKEKKSWFGWSKKGSKDTSDDSGDSKLVKKF
SKLAPEDSKQRPNDSHGSSSEIPREDTGDVKRSKDKSSKKKKKKGTVGESKTESEYKKGL
RPVLWLTPDFPLKTEELLPLLDILANKVKAIRRLRELLTTKLPPGTFPVKVAIPIVPTIR
VLVTFTKFEELEPVDEFSTPLSSPTNFQDAKSKESDGSTSWISWMRGNRDELSSDSKSHS
FQDEIDPFRIPSDYAWVDANEKKRRMKAKKAKRKHKKHGATRNPETGQQTSEDVDEQL

Transcript Sequence

Gene sequence data has not been registered.